Pseudomonas aeruginosa PAO1, PA0095

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0033104 type VI protein secretion system complex
IMP
Inferred from Mutant Phenotype
ECO:0000315
mutant phenotype evidence used in manual assertion
21325275 Reviewed by curator
Biological Process GO:0033103 protein secretion by the type VI secretion system
IMP
Inferred from Mutant Phenotype
ECO:0000315
mutant phenotype evidence used in manual assertion
21325275 Reviewed by curator

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae03070 Bacterial secretion system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF06715 Gp5 C-terminal repeat (3 copies) IPR010609 Gp5, C-terminal 529 552 2.5E-5
TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein IPR006533 Type VI secretion system, RhsGE-associated Vgr protein 22 506 2.7E-215
Gene3D G3DSA:2.30.110.50 190 223 2.4E-137
TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset 11 524 5.9E-209
Pfam PF05954 Phage late control gene D protein (GPD) 29 330 2.0E-105
Gene3D G3DSA:2.30.110.50 14 97 2.4E-137
Gene3D G3DSA:3.55.50.10 98 189 2.4E-137
MobiDBLite mobidb-lite consensus disorder prediction 645 674 -
Pfam PF06715 Gp5 C-terminal repeat (3 copies) IPR010609 Gp5, C-terminal 633 656 5.6E-5
SUPERFAMILY SSF69279 189 363 5.1E-37
Gene3D G3DSA:2.30.110.50 287 333 2.4E-137
SUPERFAMILY SSF69349 442 608 8.63E-49
Gene3D G3DSA:2.40.50.230 IPR037026 Vgr protein, OB-fold domain superfamily 355 457 1.3E-49
SUPERFAMILY SSF69255 365 452 1.36E-35
SUPERFAMILY SSF69349 580 723 8.63E-24
Gene3D G3DSA:3.30.1920.30 224 286 2.4E-137
MobiDBLite mobidb-lite consensus disorder prediction 645 669 -
SUPERFAMILY SSF69279 11 184 7.65E-64

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.