Pseudomonas aeruginosa PAO1, PA0105 (coxB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0020037 heme binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF13442
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02790
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004129 cytochrome-c oxidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR22888
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0009055 electron transfer activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF13442
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0022900 electron transport chain
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02790
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005507 copper ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00116
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016491 oxidoreductase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02866
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Energy metabolism Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae00190 Oxidative phosphorylation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF49503 Cupredoxins IPR008972 Cupredoxin 116 257 9.84E-54
NCBIfam TIGR02866 JCVI: cytochrome c oxidase subunit II IPR014222 Cytochrome c oxidase, subunit II 32 251 1.4E-58
Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III IPR009056 Cytochrome c-like domain 274 348 2.7E-10
FunFam G3DSA:1.10.287.90:FF:000009 Cytochrome c oxidase subunit 2 - - 37 113 1.6E-42
PRINTS PR01166 Cytochrome c oxidase subunit II signature - - 206 223 1.4E-39
Gene3D G3DSA:1.10.760.10 - IPR036909 Cytochrome c-like domain superfamily 254 374 1.7E-28
Gene3D G3DSA:2.60.40.420 - IPR008972 Cupredoxin 114 252 9.8E-80
PRINTS PR01166 Cytochrome c oxidase subunit II signature - - 81 93 1.4E-39
SUPERFAMILY SSF81464 Cytochrome c oxidase subunit II-like, transmembrane region IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily 12 112 4.74E-25
PRINTS PR01166 Cytochrome c oxidase subunit II signature - - 186 206 1.4E-39
Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain IPR011759 Cytochrome C oxidase subunit II, transmembrane domain 23 104 7.8E-13
Gene3D G3DSA:1.10.287.90 - IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily 37 113 9.8E-80
Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain IPR002429 Cytochrome c oxidase subunit II-like C-terminal 121 240 1.2E-36
PRINTS PR01166 Cytochrome c oxidase subunit II signature - - 93 113 1.4E-39
SUPERFAMILY SSF46626 Cytochrome c IPR036909 Cytochrome c-like domain superfamily 221 358 9.88E-24
PRINTS PR01166 Cytochrome c oxidase subunit II signature - - 224 241 1.4E-39
PANTHER PTHR22888 CYTOCHROME C OXIDASE, SUBUNIT II IPR045187 Cytochrome c/quinol oxidase subunit II 9 259 2.0E-79
PRINTS PR01166 Cytochrome c oxidase subunit II signature - - 162 183 1.4E-39
PRINTS PR01166 Cytochrome c oxidase subunit II signature - - 115 134 1.4E-39

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.