Pseudomonas aeruginosa PAO1, PA0119

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006835 dicarboxylic acid transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01300
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015293 symporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR42865
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR42865
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00173 Glutamate-aspartate symporter signature - - 50 70 3.7E-29
Gene3D G3DSA:1.10.3860.10 Sodium:dicarboxylate symporter IPR036458 Sodium:dicarboxylate symporter superfamily 6 414 2.2E-98
PRINTS PR00173 Glutamate-aspartate symporter signature - - 334 353 3.7E-29
Pfam PF00375 Sodium:dicarboxylate symporter family IPR001991 Sodium:dicarboxylate symporter 16 408 3.3E-96
PRINTS PR00173 Glutamate-aspartate symporter signature - - 9 29 3.7E-29
PRINTS PR00173 Glutamate-aspartate symporter signature - - 152 174 3.7E-29
PRINTS PR00173 Glutamate-aspartate symporter signature - - 80 105 3.7E-29
PRINTS PR00173 Glutamate-aspartate symporter signature - - 299 325 3.7E-29
Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. IPR023954 C4-dicarboxylate transport protein 8 435 36.486713
PANTHER PTHR42865 PROTON/GLUTAMATE-ASPARTATE SYMPORTER IPR001991 Sodium:dicarboxylate symporter 12 418 1.3E-89
FunFam G3DSA:1.10.3860.10:FF:000001 C4-dicarboxylate transport protein - - 7 414 0.0
PRINTS PR00173 Glutamate-aspartate symporter signature - - 199 218 3.7E-29
SUPERFAMILY SSF118215 Proton glutamate symport protein IPR036458 Sodium:dicarboxylate symporter superfamily 16 409 1.44E-106

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.