Pseudomonas aeruginosa PAO1, PA0129 (bauD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Upstream Motifs

*Up to 500bp upstream
Name Start Stop Strand Evidence PMID
Inverted repeat: AGGCATGGTCG-N4-CGACCATGCCT 147521 147546 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Rho-independent transcription terminator TERM 28 147522 147545 - ECO:0000246
computational combinatorial evidence used in automatic assertion
17313685 Details

Motifs annotated in this feature

Name Start Stop Strand Evidence PMID
Palindrome 146338 146357 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details

Downstream motifs

*Up to 500bp downstream
Name Start Stop Strand Evidence PMID
Inverted repeat: AAGCCCGGCCA-N1-TGGCCGGGCTT 145901 145923 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Rho-independent transcription terminator TERM 26 145903 145921 - ECO:0000246
computational combinatorial evidence used in automatic assertion
17313685 Details
Rho-independent transcription terminator TERM 27 145903 145921 + ECO:0000246
computational combinatorial evidence used in automatic assertion
17313685 Details
Shine-Dalgarno sequence 145533 145535 + ECO:0000256
match to sequence model evidence used in automatic assertion
Details