Pseudomonas aeruginosa PAO1, PA0159

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Upstream Motifs

*Up to 500bp upstream
Name Start Stop Strand Evidence PMID
Inverted repeat: CGCCGTAGCA-N76-TGCTACGGCG 182595 182690 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Inverted repeat: GACGCCGGGC-N45-GCCCGGCGTC 182655 182719 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Inverted repeat: ACGCCGGGCA-N5-TGCCCGGCGT 182656 182680 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details

Motifs annotated in this feature

Name Start Stop Strand Evidence PMID
Inverted repeat: AGCAGGGCGA-N80-TCGCCCTGCT 183387 183486 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details

Downstream motifs

*Up to 500bp downstream
Name Start Stop Strand Evidence PMID
Inverted repeat: CGCCGCATAT-N1-ATATGCGGCG 184084 184104 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Inverted repeat: TTTTTTTGCC-N72-GGCAAAAAAA 184106 184197 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Rho-independent transcription terminator TERM 32 184084 184104 + ECO:0000246
computational combinatorial evidence used in automatic assertion
17313685 Details
Shine-Dalgarno sequence 183811 183814 + ECO:0000256
match to sequence model evidence used in automatic assertion
Details