Pseudomonas aeruginosa PAO1, PA0279

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00418
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00418
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00778 Bacterial regulatory protein ArsR family signature IPR001845 HTH ArsR-type DNA-binding domain 44 59 7.5E-5
PRINTS PR00778 Bacterial regulatory protein ArsR family signature IPR001845 HTH ArsR-type DNA-binding domain 59 74 7.5E-5
Gene3D G3DSA:1.10.10.10 - IPR036388 Winged helix-like DNA-binding domain superfamily 6 94 2.1E-14
PANTHER PTHR39168 TRANSCRIPTIONAL REGULATOR-RELATED - - 1 227 4.0E-92
SUPERFAMILY SSF46785 Winged helix DNA-binding domain IPR036390 Winged helix DNA-binding domain superfamily 9 86 5.45E-15
CDD cd00090 HTH_ARSR IPR011991 ArsR-like helix-turn-helix domain 11 86 5.81455E-12
SMART SM00418 arsrmega2 IPR001845 HTH ArsR-type DNA-binding domain 9 88 1.6E-11
PRINTS PR00778 Bacterial regulatory protein ArsR family signature IPR001845 HTH ArsR-type DNA-binding domain 11 26 7.5E-5

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.