Pseudomonas aeruginosa PAO1, PA0279

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00778
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00778
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00778 Bacterial regulatory protein ArsR family signature IPR001845 HTH ArsR-type DNA-binding domain 11 26 7.5E-5
CDD cd00090 HTH_ARSR IPR011991 ArsR-like helix-turn-helix domain 11 86 4.79892E-12
Pfam PF12840 Helix-turn-helix domain 10 67 3.3E-7
Gene3D G3DSA:1.10.10.10 IPR036388 Winged helix-like DNA-binding domain superfamily 6 94 6.0E-14
SMART SM00418 IPR001845 HTH ArsR-type DNA-binding domain 9 88 1.6E-11
SUPERFAMILY SSF46785 IPR036390 Winged helix DNA-binding domain superfamily 9 86 5.45E-15
ProSiteProfiles PS50987 ArsR-type HTH domain profile. IPR001845 HTH ArsR-type DNA-binding domain 1 94 11.949
PRINTS PR00778 Bacterial regulatory protein ArsR family signature IPR001845 HTH ArsR-type DNA-binding domain 59 74 7.5E-5
PRINTS PR00778 Bacterial regulatory protein ArsR family signature IPR001845 HTH ArsR-type DNA-binding domain 44 59 7.5E-5

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.