Pseudomonas aeruginosa PAO1, PA0291 (oprE)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| -457 to -484 upstream fragment of oprE gene | 326761 | 326787 | + |
|
Details | |
| -347 to -457 upstream fragment of oprE gene | 326788 | 326897 | + |
|
Details | |
| oprE promoter | 327200 | 327249 | + |
|
Details | |
| transcription initiation site | 327244 | 327244 | + |
|
9595661 | Details |
| putative Integration host factor binding site | 326764 | 326790 | + |
|
9595661 | Details |
| putative RpoN binding site | 327220 | 327235 | + |
|
9595661 | Details |
| OxyR binding site | 327256 | 327270 | - |
ECO:0000314
direct assay evidence used in manual assertion |
19933365 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: AAAAAGCCCGCGTCCTCC-N1-GGAGGACGCGGGCTTTTT | 328683 | 328719 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Rho-independent transcription terminator TERM 61 | 328688 | 328714 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Rho-independent transcription terminator TERM 62 | 328688 | 328714 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |