Pseudomonas aeruginosa PAO1, PA0294 (aguR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Motifs annotated in this feature

Name Start Stop Strand Evidence PMID
Inverted repeat: CGGATTTATATCCGAT-N56-ATCGGATATAAATCCG 330974 331061 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Inverted repeat: GGCCTGGCCGA-N35-TCGGCCAGGCC 331283 331339 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Inverted repeat: CATGCTGGCG-N75-CGCCAGCATG 331303 331397 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Inverted repeat: ACGCGCGGAA-N81-TTCCGCGCGT 331468 331568 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details

Downstream motifs

*Up to 500bp downstream
Name Start Stop Strand Evidence PMID
transcriptional initiation site (+1) 330970 330970 -
Details
-10 region 330977 330983 -
Details
AguR binding site 330984 330999 -
Details
-35 region 331001 331006 -
Details
transcription initiation site 330970 330970 -
11673419 Details
-10 element (sigma 70) 330977 330983 -
11673419 Details
-35 element (sigma 70) 331001 331006 -
11673419 Details
AguR binding site 330984 330999 -
11673419 Details
Inverted repeat: CGGATTTATATCCGAT-N56-ATCGGATATAAATCCG 330974 331061 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details