Pseudomonas aeruginosa PAO1, PA0353 (ilvD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016836 hydro-lyase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00920
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009082 branched-chain amino acid biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00012
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004160 dihydroxy-acid dehydratase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00012
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Amino acid biosynthesis and metabolism Other PAO1 genes in this class
Biosynthesis of cofactors, prosthetic groups and carriers Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae01230 Biosynthesis of amino acids 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCyc ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) 19.5 ECO:0000250
sequence similarity evidence used in manual assertion
12867747
KEGG pae01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCyc BRANCHED-CHAIN-AA-SYN-PWY superpathway of branched amino acid biosynthesis 19.5 ECO:0000250
sequence similarity evidence used in manual assertion
12867747
KEGG pae00770 Pantothenate and CoA biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae01210 2-Oxocarboxylic acid metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae00290 Valine, leucine and isoleucine biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP Pantothenate and CoA biosynthesis ECO:0000037
not_recorded
KEGG pae01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP Valine, leucine and isoleucine biosynthesis ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:3.50.30.80:FF:000001 Dihydroxy-acid dehydratase - - 419 570 1.9E-66
Gene3D G3DSA:3.50.30.80 - IPR042096 Dihydroxy-acid dehydratase, C-terminal 419 570 4.5E-57
NCBIfam TIGR00110 JCVI: dihydroxy-acid dehydratase IPR004404 Dihydroxy-acid dehydratase 18 606 0.0
Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. IPR004404 Dihydroxy-acid dehydratase 4 606 44.983814
PANTHER PTHR43661 D-XYLONATE DEHYDRATASE - - 2 607 0.0
SUPERFAMILY SSF143975 IlvD/EDD N-terminal domain-like IPR037237 IlvD/EDD, N-terminal domain 3 418 0.0
Pfam PF00920 Dehydratase family IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase 34 603 0.0
SUPERFAMILY SSF52016 LeuD/IlvD-like - - 419 606 1.33E-59

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.