Pseudomonas aeruginosa PAO1, PA0399

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Amino acid biosynthesis and metabolism Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCyc PWY-801 L-homocysteine and L-cysteine interconversion 19.5 ECO:0000250
sequence similarity evidence used in manual assertion
12867747
KEGG pae01230 Biosynthesis of amino acids 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCyc PWY-821 superpathway of sulfur amino acid biosynthesis (Saccharomyces cerevisiae) 19.5 ECO:0000250
sequence similarity evidence used in manual assertion
12867747
KEGG pae00270 Cysteine and methionine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP Glycine, serine and threonine metabolism ECO:0000037
not_recorded
PseudoCyc HOMOCYSDEGR-PWY L-cysteine biosynthesis III (from L-homocysteine) 19.5 ECO:0000250
sequence similarity evidence used in manual assertion
12867747
PseudoCAP Cysteine metabolism ECO:0000037
not_recorded
KEGG pae00260 Glycine, serine and threonine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF54631 CBS-domain pair IPR046342 CBS domain superfamily 334 453 8.09E-18
SUPERFAMILY SSF53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes IPR036052 Tryptophan synthase beta chain-like, PALP domain superfamily 6 321 7.2E-93
Gene3D G3DSA:3.40.50.1100 - IPR036052 Tryptophan synthase beta chain-like, PALP domain superfamily 13 309 1.2E-108
CDD cd01561 CBS_like - - 14 310 0.0
PANTHER PTHR10314 CYSTATHIONINE BETA-SYNTHASE - - 8 318 1.7E-94
Pfam PF00571 CBS domain IPR000644 CBS domain 344 387 1.1E-9
SMART SM00116 cbs_1 IPR000644 CBS domain 344 391 1.8E-7
Gene3D G3DSA:3.10.580.10 - IPR046342 CBS domain superfamily 316 457 1.1E-15
CDD cd04608 CBS_pair_CBS IPR046353 Cystathionine beta-synthase, C-terminal domain 334 451 1.34211E-42
FunFam G3DSA:3.40.50.1100:FF:000003 Cystathionine beta-synthase - - 42 155 1.9E-44
Pfam PF00291 Pyridoxal-phosphate dependent enzyme IPR001926 Tryptophan synthase beta chain-like, PALP domain 11 303 1.4E-64
Gene3D G3DSA:3.40.50.1100 - IPR036052 Tryptophan synthase beta chain-like, PALP domain superfamily 42 155 1.2E-108

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.