Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF12833
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PF02311
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0043565 | sequence-specific DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF12833
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
PseudoCAP | Chemotaxis |
ECO:0000037
not_recorded |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
SUPERFAMILY | SSF51215 | Regulatory protein AraC | IPR037923 | Transcription regulator HTH-like | 21 | 144 | 2.48E-15 |
Gene3D | G3DSA:1.10.10.60 | - | - | - | 161 | 215 | 1.2E-13 |
SMART | SM00342 | aracneu4 | IPR018060 | DNA binding HTH domain, AraC-type | 177 | 259 | 7.2E-30 |
Pfam | PF02311 | AraC-like ligand binding domain | IPR003313 | AraC-type arabinose-binding/dimerisation domain | 12 | 141 | 2.0E-21 |
SUPERFAMILY | SSF46689 | Homeodomain-like | IPR009057 | Homeobox-like domain superfamily | 161 | 211 | 8.51E-10 |
Gene3D | G3DSA:1.10.10.60 | - | - | - | 216 | 264 | 2.2E-10 |
PANTHER | PTHR46796 | HTH-TYPE TRANSCRIPTIONAL ACTIVATOR RHAS-RELATED | - | - | 11 | 263 | 1.7E-50 |
SUPERFAMILY | SSF46689 | Homeodomain-like | IPR009057 | Homeobox-like domain superfamily | 213 | 261 | 4.48E-9 |
Pfam | PF12833 | Helix-turn-helix domain | IPR018060 | DNA binding HTH domain, AraC-type | 183 | 260 | 2.8E-20 |