Pseudomonas aeruginosa PAO1, PA0439

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01180
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01180
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Putative enzymes Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae00240 Pyrimidine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae00770 Pantothenate and CoA biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae00410 beta-Alanine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.70.20 - - - 317 415 1.8E-25
NCBIfam TIGR01037 JCVI: dihydroorotate dehydrogenase family protein IPR005720 Dihydroorotate dehydrogenase domain 5 320 2.1E-49
FunFam G3DSA:3.20.20.70:FF:000027 Dihydropyrimidine dehydrogenase [NADP(+)] - - 5 312 5.1E-118
SUPERFAMILY SSF51395 FMN-linked oxidoreductases - - 2 320 5.0E-76
CDD cd02940 DHPD_FMN - - 4 302 0.0
PANTHER PTHR43073 DIHYDROPYRIMIDINE DEHYDROGENASE [NADP(+)] - - 308 408 0.0
Gene3D G3DSA:3.20.20.70 Aldolase class I IPR013785 Aldolase-type TIM barrel 5 311 6.9E-96
FunFam G3DSA:3.30.70.20:FF:000087 NAD-dependent dihydropyrimidine dehydrogenase subunit PreA - - 309 412 7.3E-66
Pfam PF01180 Dihydroorotate dehydrogenase IPR005720 Dihydroorotate dehydrogenase domain 5 306 1.2E-27
Pfam PF14697 4Fe-4S dicluster domain - - 339 401 4.5E-22
SUPERFAMILY SSF54862 4Fe-4S ferredoxins - - 318 402 3.52E-13

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.