Pseudomonas aeruginosa PAO1, PA0451

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Upstream Motifs

*Up to 500bp upstream
Name Start Stop Strand Evidence PMID
AmrZ binding site 507439 507451 + ECO:0000314
direct assay evidence used in manual assertion
24603766 Details
Shine-Dalgarno sequence 507260 507262 - ECO:0000256
match to sequence model evidence used in automatic assertion
Details

Motifs annotated in this feature

Name Start Stop Strand Evidence PMID
Inverted repeat: CGCCGCCGCCT-N87-AGGCGGCGGCG 508089 508197 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Inverted repeat: GCCTCGCGCA-N38-TGCGCGAGGC 508109 508166 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Inverted repeat: GCCCGGCGTA-N57-TACGCCGGGC 508443 508519 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details

Downstream motifs

*Up to 500bp downstream
Name Start Stop Strand Evidence PMID
Inverted repeat: GATGGTGCGCA-N6-TGCGCACCATC 509129 509156 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details