Pseudomonas aeruginosa PAO1, PA0482 (glcB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004474 malate synthase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00728
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF51645
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006097 glyoxylate cycle
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00728
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Central intermediary metabolism Other PAO1 genes in this class
Carbon compound catabolism Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
MetaCyc crotonyl-CoA/ethylmalonyl-CoA/hydroxybutyryl-CoA cycle (engineered) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG pae00630 Glyoxylate and dicarboxylate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP Glyoxylate and dicarboxylate metabolism ECO:0000037
not_recorded
PseudoCyc GLYCOLYSIS-TCA-GLYOX-BYPASS superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass 19.5 ECO:0000250
sequence similarity evidence used in manual assertion 		12867747
PseudoCyc TCA-GLYOX-BYPASS superpathway of glyoxylate bypass and TCA 19.5 ECO:0000250
sequence similarity evidence used in manual assertion 		12867747
KEGG pae01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc chitin degradation to ethanol InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
PseudoCAP Pyruvate metabolism ECO:0000037
not_recorded
MetaCyc TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
PseudoCyc GLYOXYLATE-BYPASS glyoxylate cycle 19.5 ECO:0000250
sequence similarity evidence used in manual assertion 		12867747
KEGG pae00620 Pyruvate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae01200 Carbon metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc L-arabinose degradation IV InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc D-xylose degradation IV InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG pae01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF51645 Malate synthase G IPR011076 Malate synthase superfamily 2 723 0.0
Gene3D G3DSA:3.20.20.360 Malate synthase, domain 3 IPR046363 Malate synthase, N-terminal and TIM-barrel domains 249 584 0.0
Pfam PF01274 Malate synthase IPR001465 Malate synthase 18 697 0.0
Gene3D G3DSA:3.20.20.360 Malate synthase, domain 3 IPR046363 Malate synthase, N-terminal and TIM-barrel domains 1 237 1.3E-67
PANTHER PTHR42739 MALATE SYNTHASE G IPR006253 Malate synthase G 1 722 0.0
Hamap MF_00641 Malate synthase G [glcB]. IPR006253 Malate synthase G 1 725 426.541382
FunFam G3DSA:3.20.20.360:FF:000002 Malate synthase G - - 200 584 0.0
Gene3D G3DSA:1.20.1220.12 Malate synthase, domain III IPR044856 Malate synthase, C-terminal superfamily 585 724 5.8E-78
NCBIfam TIGR01345 JCVI: malate synthase G IPR006253 Malate synthase G 4 723 0.0
CDD cd00728 malate_synt_G IPR006253 Malate synthase G 9 720 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.