Pseudomonas aeruginosa PAO1, PA0516 (nirF)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0006091	generation of precursor metabolites and energy	IDA Inferred from Direct Assay	ECO:0000002 direct assay evidence
Biological Process	GO:0051188	obsolete cofactor biosynthetic process	IDA Inferred from Direct Assay	ECO:0000002 direct assay evidence

Functional Classifications Manually Assigned by PseudoCAP

Biosynthesis of cofactors, prosthetic groups and carriers Other PAO1 genes in this class Energy metabolism Other PAO1 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
PseudoCAP		Biosynthesis of heme d1		ECO:0000037 not_recorded
PseudoCAP		Denitrification		ECO:0000037 not_recorded

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PANTHER	PTHR47197	PROTEIN NIRF	-	-	98	389	8.7E-33
SUPERFAMILY	SSF51004	C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase	IPR011048	Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily	26	390	3.66E-75
Gene3D	G3DSA:2.140.10.20	-	IPR003143	Cytochrome cd1-nitrite reductase, C-terminal domain superfamily	19	389	4.1E-49
Pfam	PF02239	Cytochrome D1 heme domain	-	-	25	386	0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.