Pseudomonas aeruginosa PAO1, PA0551 (epd)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0042823 pyridoxal phosphate biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01532
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02800
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0048001 erythrose-4-phosphate dehydrogenase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01532
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0051287 NAD binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01532
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01532
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Biosynthesis of cofactors, prosthetic groups and carriers Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae00750 Vitamin B6 metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP Vitamin B6 metabolism ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family 154 172 2.4E-24
SUPERFAMILY SSF51735 NAD(P)-binding Rossmann-fold domains IPR036291 NAD(P)-binding domain superfamily 7 175 4.38E-51
PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family 279 294 2.4E-24
Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain 166 322 2.7E-50
SUPERFAMILY SSF55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain - - 160 324 3.27E-56
PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family 238 255 2.4E-24
PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family 181 197 2.4E-24
Gene3D G3DSA:3.40.50.720 - - - 7 335 3.2E-115
FunFam G3DSA:3.30.360.10:FF:000007 D-erythrose-4-phosphate dehydrogenase - - 159 325 9.6E-83
Gene3D G3DSA:3.30.360.10 Dihydrodipicolinate Reductase; domain 2 - - 159 325 3.2E-115
NCBIfam TIGR01532 JCVI: erythrose-4-phosphate dehydrogenase IPR006422 D-erythrose-4-phosphate dehydrogenase 7 335 0.0
PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family 115 128 2.4E-24
PANTHER PTHR43148 GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 2 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family 6 339 2.1E-113
SMART SM00846 gp_dh_n_7 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain 6 160 3.7E-68
Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain 7 108 8.2E-32
FunFam G3DSA:3.40.50.720:FF:000001 Glyceraldehyde-3-phosphate dehydrogenase - - 6 169 3.3E-46
PIRSF PIRSF000149 GAPDH IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family 4 345 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.