Pseudomonas aeruginosa PAO1, PA0584 (cca)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016779 nucleotidyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01743
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006396 RNA processing
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01743
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003723 RNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01743
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0001680 tRNA 3'-terminal CCA addition
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01261
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004810 tRNA adenylyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01261
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01261
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcription, RNA processing and degradation Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd00077 HDc IPR003607 HD/PDEase domain 227 316 1.6189E-5
Gene3D G3DSA:3.30.460.10 Beta Polymerase, domain 2 IPR043519 Nucleotidyltransferase superfamily 1 124 1.2E-27
Pfam PF01743 Poly A polymerase head domain IPR002646 Poly A polymerase, head domain 4 122 4.0E-18
SUPERFAMILY SSF81301 Nucleotidyltransferase IPR043519 Nucleotidyltransferase superfamily 1 119 1.42E-29
Pfam PF01966 HD domain IPR006674 HD domain 231 320 9.8E-8
Hamap MF_01262 CCA-adding enzyme [cca]. IPR012006 tRNA nucleotidyltransferase, proteobacteria 1 401 41.357506
PIRSF PIRSF000813 CCA_bact IPR012006 tRNA nucleotidyltransferase, proteobacteria 1 408 0.0
SUPERFAMILY SSF81891 Poly A polymerase C-terminal region-like - - 120 401 7.85E-52
Gene3D G3DSA:1.10.3090.10 - - - 125 352 1.0E-45
CDD cd05398 NT_ClassII-CCAase IPR002646 Poly A polymerase, head domain 1 118 1.15723E-30
PANTHER PTHR47545 MULTIFUNCTIONAL CCA PROTEIN - - 1 403 0.0
FunFam G3DSA:1.10.3090.10:FF:000001 Multifunctional CCA protein - - 125 354 3.6E-120
Hamap MF_01261 Multifunctional CCA protein [cca]. IPR012006 tRNA nucleotidyltransferase, proteobacteria 1 407 55.283295
Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain 149 212 3.4E-12

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.