Pseudomonas aeruginosa PAO1, PA0690 (pdtA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Motifs annotated in this feature
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| AmrZ binding site | 759481 | 759493 | - |
ECO:0000314
direct assay evidence used in manual assertion |
24603766 | Details |
| Inverted repeat: CAGCGCCGCC-N27-GGCGGCGCTG | 750085 | 750131 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: CTCCGGCAGA-N59-TCTGCCGGAG | 754972 | 755050 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: CCGCGCGCAA-N52-TTGCGCGCGG | 755454 | 755525 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GCGGGCGCTG-N52-CAGCGCCCGC | 756851 | 756922 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: ACCGGCACTGGC-N12-GCCAGTGCCGGT | 759272 | 759307 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GCGTGGCGCG-N95-CGCGCCACGC | 759670 | 759784 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: TTGCCGGCTA-N26-TAGCCGGCAA | 760710 | 760755 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Rho-independent transcription terminator TERM 171 | 762530 | 762549 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |