Pseudomonas aeruginosa PAO1, PA0763 (mucA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0032885 regulation of polysaccharide biosynthetic process
IMP
Inferred from Mutant Phenotype
ECO:0000015
mutant phenotype evidence
8759866 Reviewed by curator
Molecular Function GO:0016989 sigma factor antagonist activity
IMP
Inferred from Mutant Phenotype
ECO:0000015
mutant phenotype evidence
22842599 Reviewed by curator
Molecular Function GO:0016989 sigma factor antagonist activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF89069
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other PAO1 genes in this class
Cell wall / LPS / capsule Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Alginate biosynthesis ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF89069 N-terminal, cytoplasmic domain of anti-sigmaE factor RseA IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily 6 72 7.32E-14
Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain IPR005573 Anti sigma-E protein RseA, C-terminal 124 175 2.7E-11
CDD cd16328 RseA_N IPR005572 Anti sigma-E protein RseA, N-terminal 7 57 1.35752E-16
Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain IPR005572 Anti sigma-E protein RseA, N-terminal 7 75 2.6E-16
Gene3D G3DSA:1.10.10.880 - IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily 6 72 3.0E-20
FunFam G3DSA:1.10.10.880:FF:000002 Sigma factor AlgU regulatory protein MucA - - 6 72 1.6E-37
PANTHER PTHR38104 - - - 1 193 3.2E-51

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.