Pseudomonas aeruginosa PAO1, PA0772 (recO)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006310 DNA recombination
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00613
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006281 DNA repair
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00613
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

DNA replication, recombination, modification and repair Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae03440 Homologous recombination 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF57863 ArfGap/RecO-like zinc finger IPR037278 ARFGAP/RecO-like zinc finger 84 142 1.7E-8
Gene3D G3DSA:2.40.50.140 - IPR012340 Nucleic acid-binding, OB-fold 5 74 1.3E-16
PANTHER PTHR33991 DNA REPAIR PROTEIN RECO IPR003717 Recombination protein O, RecO 6 230 5.6E-50
Pfam PF11967 Recombination protein O N terminal IPR022572 DNA replication/recombination mediator RecO, N-terminal 7 72 2.9E-14
NCBIfam TIGR00613 JCVI: DNA repair protein RecO IPR003717 Recombination protein O, RecO 11 145 3.3E-18
Gene3D G3DSA:1.20.1440.120 - IPR042242 Recombination protein O, C-terminal 78 230 2.2E-46
Pfam PF02565 Recombination protein O C terminal IPR003717 Recombination protein O, RecO 81 222 3.6E-20
Hamap MF_00201 DNA repair protein RecO [recO]. IPR003717 Recombination protein O, RecO 3 228 19.615116
SUPERFAMILY SSF50249 Nucleic acid-binding proteins IPR012340 Nucleic acid-binding, OB-fold 10 73 1.88E-11

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.