Pseudomonas aeruginosa PAO1, PA0781

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00593 TonB dependent receptor IPR000531 TonB-dependent receptor-like, beta-barrel 208 685 6.0E-43
MobiDBLite mobidb-lite consensus disorder prediction - - 227 241 -
PANTHER PTHR30069 TONB-DEPENDENT OUTER MEMBRANE RECEPTOR IPR039426 TonB-dependent receptor-like 3 687 2.1E-75
Gene3D G3DSA:2.40.170.20 - IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily 168 687 3.8E-72
SUPERFAMILY SSF56935 Porins - - 55 687 1.1E-94
CDD cd01347 ligand_gated_channel - - 57 687 1.61514E-61
Gene3D G3DSA:2.170.130.10 - IPR037066 TonB-dependent receptor, plug domain superfamily 51 166 6.1E-27
Pfam PF07715 TonB-dependent Receptor Plug Domain IPR012910 TonB-dependent receptor, plug domain 53 156 5.1E-20
MobiDBLite mobidb-lite consensus disorder prediction - - 218 249 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.