Pseudomonas aeruginosa PAO1, PA0817
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Shine-Dalgarno sequence | 894857 | 894860 | - |
ECO:0000256
match to sequence model evidence used in automatic assertion |
Details |
Motifs annotated in this feature
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: GCGCTGGAGTTC-N78-GAACTCCAGCGC | 895327 | 895428 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| PvdS binding site | 895741 | 895749 | - |
|
12207696 | Details |
| PvdS binding site | 895724 | 895747 | - |
ECO:0000314
direct assay evidence used in manual assertion |
22510163 | Details |
| Inverted repeat: GCGCTGGAGTTC-N78-GAACTCCAGCGC | 895327 | 895428 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |