Pseudomonas aeruginosa PAO1, PA0844 (plcH)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| PLC promoter | 921472 | 921521 | - |
|
3087958 | Details |
| Vfr binding site | 921706 | 921727 | - |
ECO:0000314
direct assay evidence used in manual assertion |
17159200 | Details |
| Inverted repeat: AAGGGCATGGAA-N6-TTCCATGCCCTT | 921651 | 921680 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Rho-independent transcription terminator TERM 216 | 921653 | 921678 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
Motifs annotated in this feature
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: AGGGCCAGCG-N35-CGCTGGCCCT | 919874 | 919928 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: CGCCAGCGGC-N36-GCCGCTGGCG | 920763 | 920818 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: CGAAGGTCTG-N45-CAGACCTTCG | 918910 | 918974 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |