Pseudomonas aeruginosa PAO1, PA0852 (cbpD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0015628 protein secretion by the type II secretion system
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 10671445 Reviewed by curator
Molecular Function GO:0008061 chitin binding
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 10671445 Reviewed by curator
Cellular Component GO:0005615 extracellular space
IDA
Inferred from Direct Assay 		ECO:0001230
mass spectrometry evidence used in manual assertion		 25488299 Reviewed by curator
Biological Process GO:0052051 obsolete interaction with host via protein secreted by type II secretion system
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 10671445 Reviewed by curator
Biological Process GO:0043952 protein transport by the Sec complex
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 10671445 Reviewed by curator

Functional Classifications Manually Assigned by PseudoCAP

Secreted Factors (toxins, enzymes, alginate) Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Xcp type II secretion system ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.70.2150 - - - 216 319 6.7E-24
Gene3D G3DSA:2.70.50.50 - - - 26 210 2.4E-69
Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading IPR004302 Cellulose/chitin-binding protein, N-terminal 26 207 3.0E-45
CDD cd21177 LPMO_AA10 - - 26 207 3.36606E-72
SUPERFAMILY SSF81296 E set domains IPR014756 Immunoglobulin E-set 26 210 1.01E-54
Pfam PF18416 N-acetylglucosamine binding protein domain 2 IPR041029 N-acetylglucosamine binding protein A domain 2 217 315 2.3E-26
PANTHER PTHR34823 GLCNAC-BINDING PROTEIN A - - 329 388 1.3E-100

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.