Pseudomonas aeruginosa PAO1, PA0864

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:PF02311	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003700	DNA-binding transcription factor activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PF12833	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0043565	sequence-specific DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF12833	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PANTHER	PTHR11019	HTH-TYPE TRANSCRIPTIONAL REGULATOR NIMR	-	-	5	258	2.6E-75
FunFam	G3DSA:1.10.10.60:FF:000132	AraC family transcriptional regulator	-	-	153	256	8.6E-34
SMART	SM00342	aracneu4	IPR018060	DNA binding HTH domain, AraC-type	172	253	1.2E-23
SUPERFAMILY	SSF46689	Homeodomain-like	IPR009057	Homeobox-like domain superfamily	210	257	3.36E-7
Gene3D	G3DSA:2.60.120.10	Jelly Rolls	IPR014710	RmlC-like jelly roll fold	9	97	9.0E-10
CDD	cd06124	cupin_NimR-like_N	-	-	16	110	1.00741E-35
Pfam	PF02311	AraC-like ligand binding domain	IPR003313	AraC-type arabinose-binding/dimerisation domain	24	109	3.7E-7
Gene3D	G3DSA:1.10.10.60	-	-	-	152	260	2.8E-21
SUPERFAMILY	SSF51182	RmlC-like cupins	IPR011051	RmlC-like cupin domain superfamily	14	177	2.96E-14
Pfam	PF12833	Helix-turn-helix domain	IPR018060	DNA binding HTH domain, AraC-type	178	254	1.3E-20

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.