Pseudomonas aeruginosa PAO1, PA0895 (aruC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006527 arginine catabolic process
IDA
Inferred from Direct Assay
ECO:0000314
direct assay evidence used in manual assertion
16593724 Reviewed by curator
Molecular Function GO:0003992 N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
IDA
Inferred from Direct Assay
ECO:0000314
direct assay evidence used in manual assertion
16593724 Reviewed by curator
Biological Process GO:0006526 arginine biosynthetic process
IDA
Inferred from Direct Assay
ECO:0000314
direct assay evidence used in manual assertion
16593724 Reviewed by curator
Biological Process GO:0006520 cellular amino acid metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03246
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0030170 pyridoxal phosphate binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00202
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006525 arginine metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01107
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.40.640.10
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008483 transaminase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00202
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Amino acid biosynthesis and metabolism Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCyc ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) 19.5 ECO:0000250
sequence similarity evidence used in manual assertion
12867747
PseudoCyc GLUTORN-PWY L-ornithine biosynthesis 19.5 ECO:0000250
sequence similarity evidence used in manual assertion
12867747
KEGG pae01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCyc ARG-PRO-PWY L-arginine degradation VI (arginase 2 pathway) 19.5 ECO:0000250
sequence similarity evidence used in manual assertion
12867747
PseudoCyc AST-PWY L-arginine degradation II (AST pathway) 19.5 ECO:0000250
sequence similarity evidence used in manual assertion
12867747
KEGG pae00330 Arginine and proline metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd00610 OAT_like IPR005814 Aminotransferase class-III 5 400 2.29749E-152
PIRSF PIRSF000521 IPR005814 Aminotransferase class-III 172 403 1.6E-32
ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. IPR005814 Aminotransferase class-III 223 260 -
Gene3D G3DSA:3.90.1150.10 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 26 394 0.0
Pfam PF00202 Aminotransferase class-III IPR005814 Aminotransferase class-III 20 400 7.5E-126
TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family IPR004636 Acetylornithine/Succinylornithine transaminase family 16 400 0.0
TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family IPR017652 Acetyl/Succinylornithine transaminase family, bacteria 8 404 0.0
SUPERFAMILY SSF53383 IPR015424 Pyridoxal phosphate-dependent transferase 16 402 5.32E-127
PIRSF PIRSF000521 IPR005814 Aminotransferase class-III 28 159 1.8E-5
Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. IPR004636 Acetylornithine/Succinylornithine transaminase family 16 403 70.443
Gene3D G3DSA:3.40.640.10 IPR015421 Pyridoxal phosphate-dependent transferase, major domain 60 305 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.