Pseudomonas aeruginosa PAO1, PA0938 (wzz2)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0043165 Gram-negative-bacterium-type cell outer membrane assembly
IDA
Inferred from Direct Assay
ECO:0000314
direct assay evidence used in manual assertion
12534470 Reviewed by curator
Biological Process GO:0043165 Gram-negative-bacterium-type cell outer membrane assembly
IDA
Inferred from Direct Assay
ECO:0000314
direct assay evidence used in manual assertion
24309320 Reviewed by curator
Cellular Component GO:0016020 membrane
IDA
Inferred from Direct Assay
ECO:0000314
direct assay evidence used in manual assertion
23955007 Reviewed by curator
Biological Process GO:0009243 O antigen biosynthetic process
EXP
Inferred from Experiment
ECO:0000269
experimental evidence used in manual assertion
12534470 Reviewed by curator
Cellular Component GO:0005886 plasma membrane
IDA
Inferred from Direct Assay
ECO:0000314
direct assay evidence used in manual assertion
23955007 Reviewed by curator
Biological Process GO:0043165 Gram-negative-bacterium-type cell outer membrane assembly
ISS
Inferred from Sequence or Structural Similarity
ECO:0000250
sequence similarity evidence used in manual assertion
20418877 Reviewed by curator
Cellular Component GO:0005886 plasma membrane
IDA
Inferred from Direct Assay
ECO:0000314
direct assay evidence used in manual assertion
12534470 Reviewed by curator
Cellular Component GO:0098567 periplasmic side of plasma membrane
IDA
Inferred from Direct Assay
ECO:0000314
direct assay evidence used in manual assertion
12534470 Reviewed by curator
Cellular Component GO:0009276 Gram-negative-bacterium-type cell wall
IDA
Inferred from Direct Assay
ECO:0000314
direct assay evidence used in manual assertion
24309320 Reviewed by curator
Biological Process GO:0009103 lipopolysaccharide biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02706
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02706
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:3.30.1890.10:FF:000005 Chain length determinant protein - - 222 334 2.0E-74
PANTHER PTHR32309 TYROSINE-PROTEIN KINASE - - 1 430 1.9E-57
Pfam PF02706 Chain length determinant protein IPR003856 Polysaccharide chain length determinant N-terminal domain 13 81 5.6E-14
Gene3D G3DSA:3.30.1890.10 - - - 220 339 9.3E-21
SUPERFAMILY SSF160355 Bacterial polysaccharide co-polymerase-like - - 71 220 4.19E-12
Gene3D G3DSA:3.30.1890.10 - - - 62 219 7.6E-8
Pfam PF13807 G-rich domain on putative tyrosine kinase IPR032807 Tyrosine kinase, G-rich domain 368 415 1.3E-9
Coils Coil Coil - - 222 242 -
Coils Coil Coil - - 319 346 -
SUPERFAMILY SSF160355 Bacterial polysaccharide co-polymerase-like - - 221 389 1.57E-16

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.