Pseudomonas aeruginosa PAO1, PA0978

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0003676	nucleic acid binding	ISM Inferred from Sequence Model Term mapped from: InterPro:G3DSA:3.30.420.10	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0015074	DNA integration	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00665	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Related to phage, transposon, or plasmid Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF13276	HTH-like domain	IPR025948	HTH-like domain	32	83	4.9E-12
PANTHER	PTHR46889	TRANSPOSASE INSF FOR INSERTION SEQUENCE IS3B-RELATED	-	-	1	267	9.8E-74
NCBIfam	NF033516	NCBIFAM: IS3 family transposase	IPR048020	IS3 transposase	2	263	3.7E-89
SUPERFAMILY	SSF53098	Ribonuclease H-like	IPR012337	Ribonuclease H-like superfamily	101	263	1.9E-41
Pfam	PF00665	Integrase core domain	IPR001584	Integrase, catalytic core	108	206	2.1E-25
Gene3D	G3DSA:3.30.420.10	-	IPR036397	Ribonuclease H superfamily	104	261	7.4E-29

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.