Pseudomonas aeruginosa PAO1, PA0999 (pqsD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016746 transferase activity, transferring acyl groups
IDA
Inferred from Direct Assay
ECO:0000314
direct assay evidence used in manual assertion
18728009 Reviewed by curator
Biological Process GO:0044550 secondary metabolite biosynthetic process
IMP
Inferred from Mutant Phenotype
ECO:0000015
mutant phenotype evidence
12426334 Reviewed by curator
Biological Process GO:0006633 fatty acid biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08545
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016746 transferase activity, transferring acyl groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF53901
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08545
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Biosynthesis of cofactors, prosthetic groups and carriers Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae02024 Quorum sensing 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP Fatty acid biosynthesis (path 1) ECO:0000037
not_recorded
MetaCyc fatty acid biosynthesis initiation I InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG pae02025 Biofilm formation - Pseudomonas aeruginosa 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCyc PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis 19.5 ECO:0000250
sequence similarity evidence used in manual assertion
12867747
PseudoCyc PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis 19.5 ECO:0000250
sequence similarity evidence used in manual assertion
12867747

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.47.10 - IPR016039 Thiolase-like 176 337 1.2E-49
CDD cd00830 KAS_III - - 6 327 9.83721E-130
Gene3D G3DSA:3.40.47.10 - IPR016039 Thiolase-like 1 175 1.5E-67
FunFam G3DSA:3.40.47.10:FF:000119 Anthraniloyl-CoA anthraniloyltransferase - - 176 324 5.6E-67
Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IPR013747 Beta-ketoacyl-[acyl-carrier-protein] synthase III, C-terminal 242 328 3.0E-27
PANTHER PTHR43091 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE - - 4 328 4.9E-83
Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IPR013751 Beta-ketoacyl-[acyl-carrier-protein] synthase III, N-terminal 107 188 3.5E-23
SUPERFAMILY SSF53901 Thiolase-like IPR016039 Thiolase-like 8 329 1.96E-57

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.