Pseudomonas aeruginosa PAO1, PA1000 (pqsE)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Operons

Operon name: pqsA-pqsB-pqsC-pqsD-pqsE (5 gene members)
Locus Tag Gene Name Description Start End Strand Type
PA0996 pqsA PqsA 1078462 1080015 + CDS
Gene Details
PA0997 pqsB PqsB 1080009 1080860 + CDS
Gene Details
PA0998 pqsC PqsC 1080853 1081899 + CDS
Gene Details
PA0999 pqsD 3-oxoacyl-[acyl-carrier-protein] synthase III 1081942 1082955 + CDS
Gene Details
PA1000 pqsE Quinolone signal response protein 1082949 1083854 + CDS
Gene Details
Evidence
Computationally-predicted.
References
DOOR: a database for prokaryotic operons.
Mao F, Dam P, Chou J, Olman V, Xu Y
Nucleic Acids Res. 2009 Jan;37(Database issue):D459-63
PubMed ID: 18988623
Cross-References
DOOR: 13317
Operon name: pqsABCDE (5 gene members)
Locus Tag Gene Name Description Start End Strand Type
PA0996 pqsA PqsA 1078462 1080015 + CDS
Gene Details
PA0997 pqsB PqsB 1080009 1080860 + CDS
Gene Details
PA0998 pqsC PqsC 1080853 1081899 + CDS
Gene Details
PA0999 pqsD 3-oxoacyl-[acyl-carrier-protein] synthase III 1081942 1082955 + CDS
Gene Details
PA1000 pqsE Quinolone signal response protein 1082949 1083854 + CDS
Gene Details
Evidence
A transcription unit is inferred from author statement. In this case, there is often a set of adjacent genes, encoded in the same direction, coding for products that participate in the same metabolic pathway or biological process.
References
Mutation analysis of the Pseudomonas aeruginosa mvfR and pqsABCDE gene promoters demonstrates complex quorum-sensing circuitry.
Xiao G, He J, Rahme LG
Microbiology (Reading, Engl.) 2006 Jun;152(Pt 6):1679-86
PubMed ID: 16735731
Cross-References
PseudoCAP: 41769
Operon name: pqsABCDE (5 gene members)
Locus Tag Gene Name Description Start End Strand Type
PA0996 pqsA PqsA 1078462 1080015 + CDS
Gene Details
PA0997 pqsB PqsB 1080009 1080860 + CDS
Gene Details
PA0998 pqsC PqsC 1080853 1081899 + CDS
Gene Details
PA0999 pqsD 3-oxoacyl-[acyl-carrier-protein] synthase III 1081942 1082955 + CDS
Gene Details
PA1000 pqsE Quinolone signal response protein 1082949 1083854 + CDS
Gene Details
Evidence
A transcription unit is inferred from author statement. In this case, there is often a set of adjacent genes, encoded in the same direction, coding for products that participate in the same metabolic pathway or biological process.
References
Mutation analysis of the Pseudomonas aeruginosa mvfR and pqsABCDE gene promoters demonstrates complex quorum-sensing circuitry.
Xiao G, He J, Rahme LG
Microbiology (Reading, Engl.) 2006 Jun;152(Pt 6):1679-86
PubMed ID: 16735731
Cross-References
PseudoCAP: 41768
Operon name: pqsBCDE (4 gene members)
Locus Tag Gene Name Description Start End Strand Type
PA0997 pqsB PqsB 1080009 1080860 + CDS
Gene Details
PA0998 pqsC PqsC 1080853 1081899 + CDS
Gene Details
PA0999 pqsD 3-oxoacyl-[acyl-carrier-protein] synthase III 1081942 1082955 + CDS
Gene Details
PA1000 pqsE Quinolone signal response protein 1082949 1083854 + CDS
Gene Details
Evidence
A transcription unit is inferred from author statement. In this case, there is often a set of adjacent genes, encoded in the same direction, coding for products that participate in the same metabolic pathway or biological process.
References
The Pseudomonas aeruginosa transcriptome in planktonic cultures and static biofilms using RNA sequencing.
Dötsch A, Eckweiler D, Schniederjans M, Zimmermann A, Jensen V, Scharfe M, Geffers R, Häussler S
PLoS ONE 2012 ;7(2):e31092
PubMed ID: 22319605
Cross-References
PseudoCAP: 41770