Pseudomonas aeruginosa PAO1, PA1009

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF028103
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PIRSF PIRSF028103 GcvR IPR016867 Glycine cleavage system transcriptional repressor 7 182 3.4E-67
PANTHER PTHR34875 UPF0237 PROTEIN MJ1558 - - 4 183 3.7E-43
SUPERFAMILY SSF55021 ACT-like IPR045865 ACT-like domain 95 181 7.67E-15
CDD cd04869 ACT_GcvR_2 - - 99 179 8.15892E-32
Gene3D G3DSA:3.30.70.260 - - - 96 184 1.6E-15
Pfam PF13740 ACT domain - - 9 83 4.1E-15
Gene3D G3DSA:3.30.70.260 - - - 7 90 3.1E-7
SUPERFAMILY SSF55021 ACT-like IPR045865 ACT-like domain 7 87 5.49E-9

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.