Pseudomonas aeruginosa PAO1, PA1015

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00346	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003677	DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00346	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF09339	IclR helix-turn-helix domain	IPR005471	Transcription regulator IclR, N-terminal	17	64	1.9E-12
Gene3D	G3DSA:3.30.450.40	-	IPR029016	GAF-like domain superfamily	90	257	2.0E-25
PANTHER	PTHR30136	HELIX-TURN-HELIX TRANSCRIPTIONAL REGULATOR, ICLR FAMILY	-	-	1	259	5.8E-45
SUPERFAMILY	SSF55781	GAF domain-like	-	-	73	255	6.54E-26
Pfam	PF01614	Bacterial transcriptional regulator	IPR014757	Transcription regulator IclR, C-terminal	134	253	7.6E-10
Gene3D	G3DSA:1.10.10.10	-	IPR036388	Winged helix-like DNA-binding domain superfamily	10	87	7.4E-14
FunFam	G3DSA:3.30.450.40:FF:000098	IclR family transcriptional regulator	-	-	90	257	3.4E-115
SUPERFAMILY	SSF46785	Winged helix DNA-binding domain	IPR036390	Winged helix DNA-binding domain superfamily	15	86	4.17E-12
SMART	SM00346	iclrneu	IPR005471	Transcription regulator IclR, N-terminal	15	104	1.7E-12

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.