Pseudomonas aeruginosa PAO1, PA1094 (fliD)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: GGGAGGAAGGG-N4-CCCTTCCTCCC | 1184553 | 1184578 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Rho-independent transcription terminator TERM 303 | 1184553 | 1184578 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Shine-Dalgarno sequence | 1185049 | 1185052 | + |
ECO:0000256
match to sequence model evidence used in automatic assertion |
Details |
Motifs annotated in this feature
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: CGGCAGCGGCG-N61-CGCCGCTGCCG | 1185647 | 1185729 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: CTGATCGCCT-N93-AGGCGATCAG | 1186062 | 1186174 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Shine-Dalgarno sequence | 1186596 | 1186599 | + |
ECO:0000256
match to sequence model evidence used in automatic assertion |
Details |