Pseudomonas aeruginosa PAO1, PA1101 (fliF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0009276 Gram-negative-bacterium-type cell wall
IDA
Inferred from Direct Assay 		ECO:0000002
direct assay evidence
Biological Process GO:0009296 obsolete flagellum assembly
IDA
Inferred from Direct Assay 		ECO:0000002
direct assay evidence
Biological Process GO:0006928 movement of cell or subcellular component
IDA
Inferred from Direct Assay 		ECO:0000002
direct assay evidence
Cellular Component GO:0009431 bacterial-type flagellum basal body, MS ring
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00206
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003774 motor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00206
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0071973 bacterial-type flagellum-dependent cell motility
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00206
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Cell wall / LPS / capsule Other PAO1 genes in this class
Motility & Attachment Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae02040 Flagellar assembly 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP Flagella assembly ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF01514 Secretory protein of YscJ/FliF family IPR006182 Flagellar M-ring , N-terminal 63 239 1.8E-65
NCBIfam TIGR00206 JCVI: flagellar basal-body MS-ring/collar protein FliF IPR000067 Flagellar M-ring protein FliF 34 513 1.1E-92
PIRSF PIRSF004862 FliF IPR000067 Flagellar M-ring protein FliF 27 598 0.0
Pfam PF08345 Flagellar M-ring protein C-terminal IPR013556 Flagellar M-ring C-terminal 272 469 6.4E-48
PRINTS PR01009 Flagellar M-ring protein signature IPR000067 Flagellar M-ring protein FliF 392 416 2.2E-41
PRINTS PR01009 Flagellar M-ring protein signature IPR000067 Flagellar M-ring protein FliF 215 233 2.2E-41
PRINTS PR01009 Flagellar M-ring protein signature IPR000067 Flagellar M-ring protein FliF 140 158 2.2E-41
PANTHER PTHR30046 FLAGELLAR M-RING PROTEIN IPR043427 Lipoprotein YscJ/Flagellar M-ring protein 28 597 0.0
Gene3D G3DSA:3.30.300.30 - IPR045851 AMP-binding enzyme, C-terminal domain superfamily 139 242 8.8E-29
MobiDBLite mobidb-lite consensus disorder prediction - - 296 392 -
PRINTS PR01009 Flagellar M-ring protein signature IPR000067 Flagellar M-ring protein FliF 172 186 2.2E-41
PRINTS PR01009 Flagellar M-ring protein signature IPR000067 Flagellar M-ring protein FliF 285 303 2.2E-41

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.