Pseudomonas aeruginosa PAO1, PA1119 (yfiB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01021
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Membrane proteins Other PAO1 genes in this class
Cell wall / LPS / capsule Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR01021 OMPA domain signature IPR006664 Outer membrane protein, bacterial 95 110 1.4E-11
Gene3D G3DSA:3.30.1330.60 - IPR036737 OmpA-like domain superfamily 34 168 6.2E-41
PRINTS PR01021 OMPA domain signature IPR006664 Outer membrane protein, bacterial 65 87 1.4E-11
PRINTS PR01021 OMPA domain signature IPR006664 Outer membrane protein, bacterial 110 126 1.4E-11
SUPERFAMILY SSF103088 OmpA-like IPR036737 OmpA-like domain superfamily 52 165 3.14E-33
Pfam PF00691 OmpA family IPR006665 OmpA-like domain 65 159 8.7E-21
CDD cd07185 OmpA_C-like IPR006665 OmpA-like domain 63 165 1.10719E-40
PANTHER PTHR30329 STATOR ELEMENT OF FLAGELLAR MOTOR COMPLEX - - 46 166 2.6E-33

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.