Pseudomonas aeruginosa PAO1, PA1130 (rhlC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009247 glycolipid biosynthetic process
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 11359576 Reviewed by curator
Molecular Function GO:0016757 transferase activity, transferring glycosyl groups
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: CAZy:GT2
 ECO:0000250
sequence similarity evidence used in manual assertion		 18838391 Reviewed by curator
Molecular Function GO:0016740 transferase activity
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 11359576 Reviewed by curator

Functional Classifications Manually Assigned by PseudoCAP

Cell wall / LPS / capsule Other PAO1 genes in this class
Adaptation, Protection Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae02025 Biofilm formation - Pseudomonas aeruginosa 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae02024 Quorum sensing 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCyc PWY-6648 rhamnolipid biosynthesis 19.5 ECO:0000250
sequence similarity evidence used in manual assertion 		12867747

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd02526 GT2_RfbF_like - - 8 246 5.79006E-86
Pfam PF13641 Glycosyltransferase like family 2 - - 8 217 1.6E-6
PANTHER PTHR43179 RHAMNOSYLTRANSFERASE WBBL - - 2 287 4.0E-26
FunFam G3DSA:3.90.550.10:FF:000270 Rhamnosyltransferase 2 - - 17 219 0.0
Gene3D G3DSA:3.90.550.10 Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A IPR029044 Nucleotide-diphospho-sugar transferases 17 219 5.7E-14
NCBIfam TIGR01556 JCVI: rhamnosyltransferase IPR006446 Rhamnosyltransferase 11 291 4.3E-118
SUPERFAMILY SSF53448 Nucleotide-diphospho-sugar transferases IPR029044 Nucleotide-diphospho-sugar transferases 9 280 5.25E-23

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.