Pseudomonas aeruginosa PAO1, PA1170

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Upstream Motifs

*Up to 500bp upstream
Name Start Stop Strand Evidence PMID
Inverted repeat: GCCTTCTTCT-N80-AGAAGAAGGC 1270979 1271078 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Shine-Dalgarno sequence 1270962 1270965 + ECO:0000256
match to sequence model evidence used in automatic assertion
Details

Motifs annotated in this feature

Name Start Stop Strand Evidence PMID
Inverted repeat: GCGGCCTTCG-N88-CGAAGGCCGC 1269784 1269891 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details

Downstream motifs

*Up to 500bp downstream
Name Start Stop Strand Evidence PMID
Inverted repeat: ACGGGGCGCCC-N2-GGGCGCCCCGT 1269752 1269775 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Rho-independent transcription terminator TERM 323 1269748 1269780 - ECO:0000246
computational combinatorial evidence used in automatic assertion
17313685 Details
Rho-independent transcription terminator TERM 324 1269753 1269774 + ECO:0000246
computational combinatorial evidence used in automatic assertion
17313685 Details
Rho-independent transcription terminator TERM 325 1269753 1269774 - ECO:0000246
computational combinatorial evidence used in automatic assertion
17313685 Details