Pseudomonas aeruginosa PAO1, PA1173 (napB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0006807 | nitrogen compound metabolic process | Inferred from Sequence or Structural Similarity | ECO:0000044 sequence similarity evidence |
||
| Biological Process | GO:0006091 | generation of precursor metabolites and energy | Inferred from Sequence or Structural Similarity | ECO:0000044 sequence similarity evidence |
||
| Biological Process | GO:0009061 | anaerobic respiration |
Inferred from Sequence Model
Term mapped from: InterPro:PTHR38604
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | pae00910 | Nitrogen metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pae01120 | Microbial metabolism in diverse environments | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| PseudoCAP | Nitrogen metabolism |
ECO:0000037
not_recorded |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF48695 | Multiheme cytochromes | IPR036280 | Multiheme cytochrome superfamily | 44 | 153 | 6.55E-43 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 50 | 66 | - |
| PIRSF | PIRSF006105 | NapB | IPR005591 | Nitrate reductase cytochrome c-type subunit NapB | 3 | 162 | 2.7E-54 |
| FunFam | G3DSA:1.10.1130.10:FF:000001 | Periplasmic nitrate reductase, electron transfer subunit | - | - | 66 | 132 | 6.4E-35 |
| Gene3D | G3DSA:1.10.1130.10 | Flavocytochrome C3; Chain A | - | - | 66 | 132 | 5.3E-24 |
| Pfam | PF03892 | Nitrate reductase cytochrome c-type subunit (NapB) | IPR005591 | Nitrate reductase cytochrome c-type subunit NapB | 40 | 146 | 2.8E-46 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 31 | 73 | - |
| PANTHER | PTHR38604 | PERIPLASMIC NITRATE REDUCTASE, ELECTRON TRANSFER SUBUNIT | IPR005591 | Nitrate reductase cytochrome c-type subunit NapB | 1 | 152 | 3.2E-60 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.