Pseudomonas aeruginosa PAO1, PA1181

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08447
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Membrane proteins Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Coils Coil Coil - - 415 435 -
SMART SM00086 pac_2 IPR001610 PAC motif 501 543 5.3E-8
Gene3D G3DSA:3.20.20.450 EAL domain IPR035919 EAL domain superfamily 857 1114 1.2E-80
Pfam PF00990 Diguanylate cyclase, GGDEF domain IPR000160 GGDEF domain 685 842 1.3E-42
Gene3D G3DSA:3.30.450.20 PAS domain - - 438 496 1.2E-14
Pfam PF05231 MASE1 IPR007895 MASE1 15 289 4.5E-16
SUPERFAMILY SSF55073 Nucleotide cyclase IPR029787 Nucleotide cyclase 690 846 3.14E-47
SUPERFAMILY SSF141868 EAL domain-like IPR035919 EAL domain superfamily 865 1112 1.44E-74
CDD cd01949 GGDEF IPR000160 GGDEF domain 687 843 9.77894E-59
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 307 418 6.6E-21
Pfam PF08447 PAS fold IPR013655 PAS fold-3 450 537 1.5E-16
SMART SM00267 duf1_3 IPR000160 GGDEF domain 674 846 1.3E-58
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 539 668 1.92E-19
SMART SM00052 duf2_2 IPR001633 EAL domain 858 1105 1.3E-77
Gene3D G3DSA:2.10.70.100 - - - 498 543 7.8E-13
NCBIfam TIGR00254 JCVI: diguanylate cyclase (GGDEF) domain IPR000160 GGDEF domain 683 845 2.1E-41
SMART SM00086 pac_2 IPR001610 PAC motif 373 415 1.3E-7
Pfam PF08448 PAS fold IPR013656 PAS fold-4 563 675 1.2E-11
SMART SM00091 pas_2 IPR000014 PAS domain 427 495 5.2
PANTHER PTHR44757 DIGUANYLATE CYCLASE DGCP - - 280 426 0.0
CDD cd00130 PAS IPR000014 PAS domain 564 671 5.34782E-7
SMART SM00091 pas_2 IPR000014 PAS domain 300 366 7.2E-6
Gene3D G3DSA:3.30.450.20 PAS domain - - 296 435 1.1E-23
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 435 544 2.09E-16
Pfam PF00563 EAL domain IPR001633 EAL domain 866 1100 3.6E-61
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 299 421 1.5E-25
FunFam G3DSA:3.30.70.270:FF:000001 Diguanylate cyclase domain protein - - 679 847 8.2E-45
CDD cd00130 PAS IPR000014 PAS domain 309 412 1.77251E-8
SMART SM00086 pac_2 IPR001610 PAC motif 632 674 120.0
SMART SM00091 pas_2 IPR000014 PAS domain 555 624 1.1E-6
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 552 681 2.8E-9
CDD cd01948 EAL IPR001633 EAL domain 866 1104 4.80389E-85
Gene3D G3DSA:3.30.450.20 PAS domain - - 544 672 5.3E-21
CDD cd00130 PAS IPR000014 PAS domain 439 540 1.08368E-7
Gene3D G3DSA:3.30.70.270 - IPR043128 Reverse transcriptase/Diguanylate cyclase domain 674 848 2.9E-55
Pfam PF08447 PAS fold IPR013655 PAS fold-3 324 406 9.6E-11

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.