Pseudomonas aeruginosa PAO1, PA1192

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0008033 tRNA processing
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF004976
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. IPR012089 tRNA-cytidine(32) 2-sulfurtransferase 1 264 58.223
CDD cd01993 Alpha_ANH_like_II 34 209 1.08864E-73
SUPERFAMILY SSF52402 10 228 2.07E-56
Pfam PF01171 PP-loop family IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal 34 197 7.0E-14
Gene3D G3DSA:3.40.50.620 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold 3 258 1.7E-45
PIRSF PIRSF004976 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type 3 267 6.0E-71

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.