Pseudomonas aeruginosa PAO1, PA1193

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006284 base-excision repair
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF03352
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008725 DNA-3-methyladenine glycosylase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF03352
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006281 DNA repair
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF48150
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF48150
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF48150 DNA-glycosylase IPR011257 DNA glycosylase 37 182 2.12E-39
PANTHER PTHR30037 DNA-3-METHYLADENINE GLYCOSYLASE 1 - - 1 181 1.8E-46
Pfam PF03352 Methyladenine glycosylase IPR005019 Methyladenine glycosylase 39 131 8.1E-18
Gene3D G3DSA:1.10.340.30 Hypothetical protein; domain 2 - - 34 151 1.1E-24

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.