Pseudomonas aeruginosa PAO1, PA1245 (aprX)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| LasR binding site | 1349079 | 1349094 | + |
|
Details | |
| LasR retarded fragment at aprXDEF operon | 1348980 | 1349260 | + |
|
Details | |
| LasR binding site | 1349079 | 1349094 | + |
ECO:0000314
direct assay evidence used in manual assertion |
19682264 | Details |
| Shine-Dalgarno sequence | 1349404 | 1349407 | + |
ECO:0000256
match to sequence model evidence used in automatic assertion |
Details |
Motifs annotated in this feature
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: CCGCCACCGCCGT-N1-ACGGCGGTGGCGG | 1349480 | 1349506 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: TGGCGCTGAA-N85-TTCAGCGCCA | 1350089 | 1350193 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |