Pseudomonas aeruginosa PAO1, PA1248 (aprF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0046903 secretion
IDA
Inferred from Direct Assay
ECO:0000314
direct assay evidence used in manual assertion
1427098 Reviewed by curator
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02321
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0019867 outer membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01844
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015562 efflux transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02321
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Protein secretion/export apparatus Other PAO1 genes in this class
Secreted Factors (toxins, enzymes, alginate) Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Apr type I secretion system ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Coils Coil Coil - - 148 168 -
PANTHER PTHR30026 OUTER MEMBRANE PROTEIN TOLC - - 1 442 2.2E-93
NCBIfam TIGR01844 JCVI: TolC family outer membrane protein IPR010130 Type I secretion outer membrane protein, TolC 24 444 0.0
Pfam PF02321 Outer membrane efflux protein IPR003423 Outer membrane efflux protein 247 430 2.7E-32
MobiDBLite mobidb-lite consensus disorder prediction - - 462 481 -
Pfam PF02321 Outer membrane efflux protein IPR003423 Outer membrane efflux protein 31 219 6.3E-25
SUPERFAMILY SSF56954 Outer membrane efflux proteins (OEP) - - 26 440 1.96E-86
Gene3D G3DSA:1.20.1600.10 Outer membrane efflux proteins (OEP) - - 27 447 1.5E-81
FunFam G3DSA:1.20.1600.10:FF:000014 Alkaline protease secretion protein AprF - - 27 447 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.