Pseudomonas aeruginosa PAO1, PA1276 (cobC)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0009236	cobalamin biosynthetic process	ISS Inferred from Sequence or Structural Similarity	ECO:0000250 sequence similarity evidence used in manual assertion	2211520	Reviewed by curator
Molecular Function	GO:0030170	pyridoxal phosphate binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00155	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0009058	biosynthetic process	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00155	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0009236	cobalamin biosynthetic process	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR01140	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003824	catalytic activity	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR01140	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Biosynthesis of cofactors, prosthetic groups and carriers Other PAO1 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pae00860	Porphyrin and chlorophyll metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
MetaCyc		aminopropanol phosphate biosynthesis I	InterPro 5.36-75.0	ECO:0000259 match to InterPro signature evidence used in automatic assertion
PseudoCAP		Cobalamin biosynthesis		ECO:0000037 not_recorded
KEGG	pae01100	Metabolic pathways	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SUPERFAMILY	SSF53383	PLP-dependent transferases	IPR015424	Pyridoxal phosphate-dependent transferase	12	313	7.82E-56
PANTHER	PTHR42885	HISTIDINOL-PHOSPHATE AMINOTRANSFERASE-RELATED	-	-	51	301	5.9E-32
Gene3D	G3DSA:3.90.1150.10	Aspartate Aminotransferase, domain 1	IPR015422	Pyridoxal phosphate-dependent transferase, small domain	23	300	2.8E-50
NCBIfam	TIGR01140	JCVI: threonine-phosphate decarboxylase CobD	IPR005860	L-threonine-O-3-phosphate decarboxylase	4	322	1.5E-109
Gene3D	G3DSA:3.40.640.10	-	IPR015421	Pyridoxal phosphate-dependent transferase, major domain	34	237	2.8E-50
Coils	Coil	Coil	-	-	231	261	-
CDD	cd00609	AAT_like	-	-	23	231	1.22107E-30
Pfam	PF00155	Aminotransferase class I and II	IPR004839	Aminotransferase, class I/classII	54	308	1.2E-30

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.