Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0051188 | obsolete cofactor biosynthetic process | Inferred from Sequence or Structural Similarity | ECO:0000044 sequence similarity evidence |
||
Molecular Function | GO:0004129 | cytochrome-c oxidase activity | Inferred from Sequence or Structural Similarity | ECO:0000044 sequence similarity evidence |
||
Biological Process | GO:0009236 | cobalamin biosynthetic process | Inferred from Sequence or Structural Similarity | ECO:0000044 sequence similarity evidence |
||
Molecular Function | GO:0008939 | nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity |
Inferred from Sequence Model
Term mapped from: InterPro:SSF52733
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0009236 | cobalamin biosynthetic process |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03160
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
PseudoCyc | PWY-5508 | adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II | 19.5 |
ECO:0000250
sequence similarity evidence used in manual assertion |
12867747 |
MetaCyc | adenosylcobalamin biosynthesis from adenosylcobinamide-GDP I | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
MetaCyc | 5-methoxy-6-methylbenzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
MetaCyc | 5-methylbenzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
PseudoCyc | PWY-5509 | adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I | 19.5 |
ECO:0000250
sequence similarity evidence used in manual assertion |
12867747 |
KEGG | pae01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
PseudoCyc | P381-PWY | adenosylcobalamin biosynthesis II (late cobalt incorporation) | 19.5 |
ECO:0000250
sequence similarity evidence used in manual assertion |
12867747 |
PseudoCyc | COBALSYN-PWY | adenosylcobalamin salvage from cobinamide I | 19.5 |
ECO:0000250
sequence similarity evidence used in manual assertion |
12867747 |
KEGG | pae00860 | Porphyrin and chlorophyll metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
MetaCyc | 5-hydroxybenzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
MetaCyc | benzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
MetaCyc | adeninyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
MetaCyc | 2-methyladeninyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
PseudoCAP | Cobalamin biosynthesis |
ECO:0000037
not_recorded |
|||
MetaCyc | 5-methoxybenzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
MetaCyc | superpathway of adenosylcobalamin salvage from cobinamide II | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
FunFam | G3DSA:3.40.50.10210:FF:000001 | Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | - | - | 57 | 329 | 2.0E-108 |
PANTHER | PTHR43463 | NICOTINATE-NUCLEOTIDE--DIMETHYLBENZIMIDAZOLE PHOSPHORIBOSYLTRANSFERASE | IPR003200 | Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase | 3 | 348 | 3.0E-114 |
Pfam | PF02277 | Phosphoribosyltransferase | IPR003200 | Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase | 11 | 346 | 2.5E-130 |
Hamap | MF_00230 | Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. | IPR017846 | Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, bacterial type | 12 | 348 | 37.108204 |
NCBIfam | TIGR03160 | JCVI: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | IPR017846 | Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, bacterial type | 14 | 346 | 0.0 |
CDD | cd02439 | DMB-PRT_CobT | IPR003200 | Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase | 29 | 344 | 2.55136E-125 |
SUPERFAMILY | SSF52733 | Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) | IPR036087 | Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily | 4 | 347 | 2.75E-119 |
Gene3D | G3DSA:3.40.50.10210 | - | IPR036087 | Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily | 57 | 329 | 4.2E-127 |
Gene3D | G3DSA:1.10.1610.10 | - | IPR023195 | Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal | 12 | 339 | 4.2E-127 |