Pseudomonas aeruginosa PAO1, PA1318 (cyoB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006091 generation of precursor metabolites and energy
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Molecular Function GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02843
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0020037 heme binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR10422
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR10422
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009060 aerobic respiration
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR10422
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004129 cytochrome-c oxidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR10422
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Energy metabolism Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae00190 Oxidative phosphorylation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc arsenite oxidation I (respiratory) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc pyruvate to cytochrome <i>bo</i> oxidase electron transfer InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc aerobic respiration I (cytochrome c) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc Fe(II) oxidation InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc aerobic respiration II (cytochrome c) (yeast) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG pae01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR01165 Cytochrome c oxidase subunit I signature IPR000883 Cytochrome c oxidase subunit I 348 369 1.5E-95
CDD cd01662 Ubiquinol_Oxidase_I - - 48 552 0.0
PRINTS PR01165 Cytochrome c oxidase subunit I signature IPR000883 Cytochrome c oxidase subunit I 47 72 1.5E-95
PRINTS PR01165 Cytochrome c oxidase subunit I signature IPR000883 Cytochrome c oxidase subunit I 166 178 1.5E-95
PRINTS PR01165 Cytochrome c oxidase subunit I signature IPR000883 Cytochrome c oxidase subunit I 278 299 1.5E-95
PRINTS PR01165 Cytochrome c oxidase subunit I signature IPR000883 Cytochrome c oxidase subunit I 97 120 1.5E-95
PRINTS PR01165 Cytochrome c oxidase subunit I signature IPR000883 Cytochrome c oxidase subunit I 383 401 1.5E-95
PANTHER PTHR10422 CYTOCHROME C OXIDASE SUBUNIT 1 IPR000883 Cytochrome c oxidase subunit I 45 564 0.0
SUPERFAMILY SSF81442 Cytochrome c oxidase subunit I-like IPR036927 Cytochrome c oxidase-like, subunit I superfamily 43 559 0.0
NCBIfam TIGR02843 JCVI: cytochrome o ubiquinol oxidase subunit I IPR014207 Cytochrome o ubiquinol oxidase, subunit I 2 647 0.0
PRINTS PR01165 Cytochrome c oxidase subunit I signature IPR000883 Cytochrome c oxidase subunit I 198 216 1.5E-95
PRINTS PR01165 Cytochrome c oxidase subunit I signature IPR000883 Cytochrome c oxidase subunit I 124 148 1.5E-95
Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I IPR000883 Cytochrome c oxidase subunit I 56 504 0.0
PRINTS PR01165 Cytochrome c oxidase subunit I signature IPR000883 Cytochrome c oxidase subunit I 227 246 1.5E-95
PRINTS PR01165 Cytochrome c oxidase subunit I signature IPR000883 Cytochrome c oxidase subunit I 324 339 1.5E-95
FunFam G3DSA:1.20.210.10:FF:000002 Cytochrome o ubiquinol oxidase, subunit I - - 52 552 0.0
PRINTS PR01165 Cytochrome c oxidase subunit I signature IPR000883 Cytochrome c oxidase subunit I 411 430 1.5E-95
Gene3D G3DSA:1.20.210.10 - IPR036927 Cytochrome c oxidase-like, subunit I superfamily 31 564 0.0
PRINTS PR01165 Cytochrome c oxidase subunit I signature IPR000883 Cytochrome c oxidase subunit I 461 482 1.5E-95

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.