Pseudomonas aeruginosa PAO1, PA1319 (cyoC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006091 generation of precursor metabolites and energy
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Biological Process GO:0022904 respiratory electron transport chain
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.20.120.80
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004129 cytochrome-c oxidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00510
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR11403
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0009055 electron transfer activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR11403
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0019646 aerobic electron transport chain
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02842
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0009486 cytochrome bo3 ubiquinol oxidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02842
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Energy metabolism Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae00190 Oxidative phosphorylation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:1.20.120.80:FF:000001 Cytochrome (Ubi)quinol oxidase subunit III - - 24 209 8.6E-74
SUPERFAMILY SSF81452 Cytochrome c oxidase subunit III-like IPR035973 Cytochrome c oxidase subunit III-like superfamily 18 207 5.49E-60
PANTHER PTHR11403 CYTOCHROME C OXIDASE SUBUNIT III IPR024791 Cytochrome c oxidase subunit III 7 207 8.2E-44
CDD cd02863 Ubiquinol_oxidase_III IPR033946 Ubiquinol oxidase subunit III domain 22 207 4.94736E-102
Pfam PF00510 Cytochrome c oxidase subunit III IPR000298 Cytochrome c oxidase subunit III-like 20 207 9.4E-17
Gene3D G3DSA:1.20.120.80 - IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle 24 209 3.2E-56
NCBIfam TIGR02842 JCVI: cytochrome o ubiquinol oxidase subunit III IPR014206 Cytochrome o ubiquinol oxidase, subunit III 30 209 1.9E-85

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.