Pseudomonas aeruginosa PAO1, PA1340 (aatM)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006868 glutamine transport
IMP
Inferred from Mutant Phenotype
ECO:0000016
loss-of-function mutant phenotype evidence
18310026 Reviewed by curator
Biological Process GO:1903803 L-glutamine import across plasma membrane
IMP
Inferred from Mutant Phenotype
ECO:0000315
mutant phenotype evidence used in manual assertion
18833300 Reviewed by curator
Cellular Component GO:0043190 ATP-binding cassette (ABC) transporter complex
ISS
Inferred from Sequence or Structural Similarity
ECO:0000250
sequence similarity evidence used in manual assertion
25082951 Reviewed by curator
Biological Process GO:0051938 L-glutamate import
IMP
Inferred from Mutant Phenotype
ECO:0000315
mutant phenotype evidence used in manual assertion
18833300 Reviewed by curator
Biological Process GO:0042940 D-amino acid transport
IMP
Inferred from Mutant Phenotype
ECO:0000016
loss-of-function mutant phenotype evidence
25082951 Reviewed by curator
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01726
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016021 integral component of membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01726
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00528
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0043190 ATP-binding cassette (ABC) transporter complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01726
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00528
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0071705 nitrogen compound transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01726
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Amino acid biosynthesis and metabolism Other PAO1 genes in this class
Transport of small molecules Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain 11 115 4.0E-25
Gene3D G3DSA:1.10.3720.10 IPR035906 MetI-like superfamily 1 221 1.9E-49
ProSiteProfiles PS50928 ABC transporter integral membrane type-1 domain profile. IPR000515 ABC transporter type 1, transmembrane domain MetI-like 18 213 17.682
CDD cd06261 TM_PBP2 IPR000515 ABC transporter type 1, transmembrane domain MetI-like 18 211 1.81799E-15
Pfam PF00528 Binding-protein-dependent transport system inner membrane component IPR000515 ABC transporter type 1, transmembrane domain MetI-like 32 221 2.0E-20
SUPERFAMILY SSF161098 IPR035906 MetI-like superfamily 12 206 2.09E-40

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.