Pseudomonas aeruginosa PAO1, PA1342 (aatJ)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0005615 extracellular space
IDA
Inferred from Direct Assay
ECO:0001230
mass spectrometry evidence used in manual assertion
25488299 Reviewed by curator
Biological Process GO:0070778 L-aspartate transmembrane transport
ISO
Inferred from Sequence Orthology
Term mapped from: PseudoCAP:PP_1071
ECO:0000201
sequence orthology evidence
18310026 Reviewed by curator
Biological Process GO:0051938 L-glutamate import
ISO
Inferred from Sequence Orthology
Term mapped from: PseudoCAP:PP_1071
ECO:0000201
sequence orthology evidence
18310026 Reviewed by curator
Cellular Component GO:0043190 ATP-binding cassette (ABC) transporter complex
ISS
Inferred from Sequence or Structural Similarity
ECO:0000250
sequence similarity evidence used in manual assertion
Biological Process GO:0006868 glutamine transport
IMP
Inferred from Mutant Phenotype
Term mapped from: PseudoCAP:PP_1071
ECO:0000016
loss-of-function mutant phenotype evidence
18310026 Reviewed by curator
Biological Process GO:0006868 glutamine transport
ISO
Inferred from Sequence Orthology
Term mapped from: PseudoCAP:PP_1071
ECO:0000201
sequence orthology evidence
18310026 Reviewed by curator
Biological Process GO:0042940 D-amino acid transport
IMP
Inferred from Mutant Phenotype
ECO:0000016
loss-of-function mutant phenotype evidence
25082951 Reviewed by curator

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other PAO1 genes in this class
Amino acid biosynthesis and metabolism Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF 39 269 7.0E-51
SMART SM00062 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF 38 271 9.3E-57
CDD cd13688 PBP2_GltI_DEBP 30 268 1.77896E-114
Gene3D G3DSA:3.40.190.10 229 274 2.3E-100
SUPERFAMILY SSF53850 8 272 6.73E-64
Gene3D G3DSA:3.40.190.10 28 132 2.3E-100
Gene3D G3DSA:3.40.190.10 133 228 2.3E-100

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.