Pseudomonas aeruginosa PAO1, PA1346

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01276
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006520 cellular amino acid metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR45229
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016831 carboxy-lyase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR45229
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR45229
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR45229 CONSTITUTIVE ORNITHINE DECARBOXYLASE IPR011193 Ornithine/lysine/arginine decarboxylase 256 494 9.6E-54
Gene3D G3DSA:3.90.1150.10 Aspartate Aminotransferase, domain 1 IPR015422 Pyridoxal phosphate-dependent transferase, small domain 212 377 1.3E-40
Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain IPR005308 Orn/Lys/Arg decarboxylase, N-terminal 25 136 2.7E-8
Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain IPR000310 Orn/Lys/Arg decarboxylase, major domain 256 330 1.1E-15
Gene3D G3DSA:3.90.100.10 - - - 378 498 2.1E-27
SUPERFAMILY SSF55904 Ornithine decarboxylase C-terminal domain IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily 353 496 1.11E-23
SUPERFAMILY SSF53383 PLP-dependent transferases IPR015424 Pyridoxal phosphate-dependent transferase 235 350 1.2E-12
Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain IPR008286 Orn/Lys/Arg decarboxylase, C-terminal 358 487 3.3E-34
Gene3D G3DSA:3.40.50.2300 - - - 10 141 1.2E-15

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.